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What are the minimum system requirements to run Spectronaut™?
Although Spectronaut is developed to use as few resources as possible, the calculations made by the software are still intensive. Spectronaut was optimized for parallel computation and makes use of all CPU cores assigned in the global settings. ...What is the purpose of SpectroMine™?
SpectroMine is Biognosys’ powerful and versatile software solution for proteomics data acquired in data dependent acquisition (DDA) mode. SpectroMine will assist you with user friendly wizards dedicated to specific workflows for protein ...Which mass spectrometric vendors are supported by SpectroDive™?
SpectroDive for targeted proteomics is a vendor independent software and currently supports the following instruments: MRM (triple quadrupole -QQQ- and hybrid quadrupole-linear ion trap -QTrap- MS) • Thermo Scientific™ TSQ Series I and II • SCIEX ...How to generate targeted panel in SpectroDive™?
In SpectroDive you can generate new targeted panels directly from a library. To do that you first need to have your library loaded into the Library Perspective in SpectroDive. We recommend generating your library with Pulsar, Biognosys' search ...I want to use the data generated in Biognosys software in an external analysis tools. How can I do this?
Biognosys' software, Spectronaut, SpectroDive and SpectroMine, allow you to export practically every piece of information gathered and generated during the analysis process. For such purpose, you should use the Report Perspective as shown in Figure 1 ...
Popular Articles
Qvalue sparse, complete, and percentile: what's the difference?
Qvalues can be used to filter your data according to the error rate among your accepted entries. For example, if you set a threshold of Qvalue ≤ 0.01, you are applying an FDR threshold of 1%. Biognosys' software uses Qvalues for two different ...I want to use the data generated in Biognosys software in an external analysis tools. How can I do this?
Biognosys' software Spectronaut, SpectroDive and SpectroMine, allow you to export practically every piece of information gathered and generated during the analysis process. For such purpose, you should use the Report Perspective as shown in Figure 1 ...Definitions: Peptide, modified peptide and precursor
In bottom‑up proteomics peptides are analyzed in a mass spectrometer, usually to infer information about the proteins they come from. When you analyze your mass spectrometry results in any of Biognosys' software, you get information for different ...What is PlasmaDeepDive™ kit?
PlasmaDeepDive Reference Peptides enable absolute quantification of 100 human plasma proteins in a single measurement in scheduled MRM or PRM experiments, covering a dynamic range of six orders of magnitude, with high precision and reproducibility. ...How is my data normalized in Spectronaut™?
Why normalization? The aim of data normalization in proteomics is to correct for the variability that is not coming from the biological system itself but from the experimental process, mainly multistep sample preparation, and LC-MS instrumentation, ...