Spectronaut®
What are the minimum system requirements to run Spectronaut?
Although Spectronaut is developed to use as few resources as possible, the calculations made by the software are still intensive. Spectronaut was optimized for parallel computation and makes use of all CPU cores assigned in the global settings. ...
How is my data normalized in Spectronaut™?
Why normalization? The aim of data normalization in proteomics is to correct for the variability that is not coming from the biological system itself but from the experimental process, mainly multistep sample preparation, and LC-MS instrumentation, ...
Qvalue sparse, complete, and percentile: what's the difference?
Qvalues can be used to filter your data according to the error rate among your accepted entries. For example, if you set a threshold of Qvalue ≤ 0.01, you are applying an FDR threshold of 1%. Biognosys' software uses Qvalues for two different ...
How do I change the default settings?
The Biognosys Factory Settings or default settings are suitable for most experimental setups. However, sometimes non‑default settings are necessary or preferred. The process described below is applicable to any Biognosys software, although the ...
How do I obtain a trial license for Spectronaut™?
At Biognosys, we’re sure you’ll love our software solutions and we’re excited about you trying them out. We provide a free 30 day trial license for all of our software packages. Simply contact us here to obtain your license and start your trial. All ...
Which instruments are supported by Spectronaut®?
Spectronaut is a vendor-independent software. Spectronaut supports the following models: • Thermo Scientific™ Orbitrap Exploris™ series • Thermo Scientific™ Q Exactive™ Series • Thermo Scientific™ Orbitrap Fusion™ Series • SCIEX TripleTOF® Series • ...
Definitions: Peptide, modified peptide and precursor
In bottom-up proteomics, usually peptides are analyzed in a mass spectrometer to infer information about the proteins they come from. When you analyze your mass spectrometry results in any of Biognosys software, you get information for different ...
I want to use the data generated in Biognosys software in an external analysis tools. How can I do this?
Biognosys' software Spectronaut, SpectroDive and SpectroMine, allow you to export practically every piece of information gathered and generated during the analysis process. For such purpose, you should use the Report Perspective as shown in Figure 1 ...